fix(deploy,db,handler): close fresh-clone postgres init failure + 4 ride-along audit findings (U-3 master)

GitHub #10 reopened: operator mikeakasully cloned v2.0.50 fresh and ran the
canonical quickstart (docker compose -f deploy/docker-compose.yml up -d --build);
postgres reported unhealthy indefinitely, dependent containers never started.

Root cause: deploy/docker-compose.yml mounted a hand-curated subset of
migrations/*.up.sql + seed.sql into postgres /docker-entrypoint-initdb.d/.
Postgres applied them at initdb time. Once seed.sql referenced columns added
by migrations *after* the mounted cutoff (e.g., policy_rules.severity from
migration 000013), initdb crashed mid-seed and the container loop wedged.
Two sources of truth (compose mount list vs in-tree migration ladder)
diverged the moment a seed-touching migration shipped, and the only thing
that fixed it was hand-editing the compose file every release.

Fix: remove the dual source. Postgres boots empty; the server applies
migrations + seed at startup via RunMigrations + RunSeed. Helm has used
this pattern since day one (postgres-init emptyDir); compose now matches.

Bundled with four ride-along audit findings whose fixes share the same
schema/db code surface, so operators take the schema-change pain only once:

  cat-u-seed_initdb_schema_drift           [P1, primary] — initdb-mount fix
  cat-o-retry_interval_unit_mismatch       [P1] — column rename minutes→seconds
  cat-o-notification_created_at_dead_field [P2] — add column + populate
  cat-o-health_check_column_orphans        [P1] — drop unwired columns
  cat-u-no_version_endpoint                [P2] — add /api/v1/version

Single migration (000017_db_coupling_cleanup) bundles the three schema
changes under a DO \$\$ guard so re-application is safe; reduces
operator-visible 'schema-change releases' from four to one.

Backend
- internal/repository/postgres/db.go: add RunSeed (baseline) + RunDemoSeed
  (gated by CERTCTL_DEMO_SEED). Both idempotent (ON CONFLICT DO NOTHING in
  every shipped INSERT) so repeated boots are safe; missing-file is no-op
  so custom packaging that strips seeds still boots cleanly.
- cmd/server/main.go: invoke RunSeed (always) + RunDemoSeed (when flag set)
  immediately after RunMigrations.
- internal/repository/postgres/notification.go: NotificationRepository.Create
  now sets created_at (with time.Now() fallback when caller leaves it zero);
  scanNotification reads it back; List + ListRetryEligible SELECT extended.
- internal/repository/postgres/renewal_policy.go: column references updated
  to retry_interval_seconds across SELECT/INSERT/UPDATE sites.
- internal/api/handler/version.go: new VersionHandler exposes
  {version, commit, modified, build_time, go_version} from
  runtime/debug.ReadBuildInfo() with ldflags-supplied Version override.
- internal/api/router/router.go: register GET /api/v1/version through the
  no-auth chain (CORS + ContentType) alongside /health, /ready,
  /api/v1/auth/info.
- cmd/server/main.go: add /api/v1/version to no-auth dispatch + audit
  ExcludePaths so rollout polling doesn't dominate the audit trail.
- internal/config/config.go: add DatabaseConfig.DemoSeed +
  CERTCTL_DEMO_SEED env var.

Migration
- migrations/000017_db_coupling_cleanup.up.sql + .down.sql:
    (1) renewal_policies.retry_interval_minutes → retry_interval_seconds
        (DO \$\$ guard, idempotent re-application)
    (2) notification_events ADD COLUMN created_at TIMESTAMPTZ
        NOT NULL DEFAULT NOW()
    (3) network_scan_targets DROP orphan health_check_enabled +
        health_check_interval_seconds
- migrations/seed.sql: column reference updated to retry_interval_seconds.
- migrations/seed_demo.sql: same column rename + applied at runtime now via
  RunDemoSeed (no longer initdb-mounted).

Compose
- deploy/docker-compose.yml: drop ALL initdb mounts (10 migration files +
  seed.sql); add start_period: 30s to postgres + certctl-server healthchecks
  to absorb the runtime migration + seed application window on first boot.
- deploy/docker-compose.test.yml: same drop (+ ghost seed_test.sql mount
  removed; that file never existed); same healthcheck start_period.
- deploy/docker-compose.demo.yml: replace seed_demo.sql initdb mount with
  CERTCTL_DEMO_SEED=true env var on certctl-server.

Tests
- internal/api/handler/version_handler_test.go: TestVersion_ReturnsBuildInfo,
  TestVersion_RejectsNonGet, TestVersion_LdflagsOverride.
- internal/repository/postgres/seed_test.go: TestRunSeed_AppliesIdempotently,
  TestRunSeed_MissingFileIsNoOp, TestRunDemoSeed_AppliesIdempotently,
  TestMigration000017_RetryIntervalRename,
  TestMigration000017_NotificationCreatedAt,
  TestMigration000017_HealthCheckOrphansDropped (testcontainers, -short skips).
- internal/repository/postgres/notification_test.go:
  TestNotificationRepository_CreatedAt_IsPersisted +
  TestNotificationRepository_CreatedAt_DefaultsToNow.

CI guardrail
- .github/workflows/ci.yml: new 'Forbidden migration mount in compose initdb
  (U-3)' step grep-fails the build if any migrations/*.sql or seed*.sql
  re-appears in /docker-entrypoint-initdb.d in any compose file. Catches
  future drift before a fresh-clone operator hits it.

Spec / Docs
- api/openapi.yaml: add /api/v1/version operation under Health tag.
- docs/architecture.md: replace the 'initdb may run the same SQL' paragraph
  with a post-U-3 single-source-of-truth explanation.
- CHANGELOG.md: full unreleased-section entry covering all 5 closures,
  breaking changes, and the new env var.

Audit doc
- coverage-gap-audit-2026-04-24-v5/unified-audit.md: add new P1 #14
  cat-u-seed_initdb_schema_drift; flip the 4 ride-along findings to
   RESOLVED with closure prose pointing at this commit.

Verification: build/vet/test -short -race all clean across all touched
packages locally; govulncheck reports 0 vulnerabilities affecting our
code; OpenAPI YAML parses; CI U-3 grep guardrail clears against the
post-fix tree.
This commit is contained in:
shankar0123
2026-04-25 13:29:23 +00:00
parent aa6fafdee9
commit a3d8b9c607
23 changed files with 1157 additions and 51 deletions
+57
View File
@@ -213,6 +213,63 @@ jobs:
exit 1
fi
- name: Forbidden migration mount in compose initdb (U-3)
# U-3 closed cat-u-seed_initdb_schema_drift (GitHub #10) by
# eliminating the dual-source-of-truth between
# `migrations/*.up.sql` mounted into postgres
# `/docker-entrypoint-initdb.d/` and the same files re-applied at
# runtime by `RunMigrations`. Pre-U-3 every new migration that
# the seed depended on (000013 added `policy_rules.severity`,
# 000017 renames `retry_interval_seconds`, etc.) had to be added
# by hand to the compose mount list; missing the update crashed
# initdb on first boot, postgres flagged unhealthy, and the
# whole stack failed to start from a fresh clone. Post-U-3 the
# server is the single source of truth — `RunMigrations` +
# `RunSeed` apply everything at boot.
#
# This step grep-fails the build if any compose file under
# `deploy/` re-introduces a `migrations/.*\.sql` mount into
# `/docker-entrypoint-initdb.d`. Comments are exempt so the
# post-fix rationale block in the compose files (which
# documents WHY the mounts were removed) doesn't trip the guard.
# The demo overlay's `seed_demo.sql` is the explicit exception:
# it is tolerated only when it lives behind the
# CERTCTL_DEMO_SEED env var (post-U-3 demo path) — bare initdb
# mounts are NOT tolerated. The grep matches all compose
# mount-list shapes (`-` indented, `volumes:` indented, both),
# so any future drift surfaces here before the operator hits it
# on a fresh clone.
#
# See coverage-gap-audit-2026-04-24-v5/unified-audit.md
# cat-u-seed_initdb_schema_drift for the closure rationale, or
# internal/repository/postgres/db.go::RunSeed for the runtime
# contract.
run: |
set -e
BAD=$(grep -rnEH \
-e 'migrations/.*\.sql:.*docker-entrypoint-initdb' \
-e 'seed.*\.sql:.*docker-entrypoint-initdb' \
deploy/docker-compose.yml \
deploy/docker-compose.test.yml \
deploy/docker-compose.demo.yml \
2>/dev/null \
| grep -vE '^\s*[^:]+:[0-9]+:\s*#' \
|| true)
if [ -n "$BAD" ]; then
echo "U-3 regression: migration/seed mount into postgres initdb reappeared:"
echo "$BAD"
echo ""
echo "The post-U-3 contract is: postgres comes up with an empty"
echo "schema and the server applies migrations + seed at boot via"
echo "internal/repository/postgres.RunMigrations + RunSeed. Demo"
echo "data lives behind CERTCTL_DEMO_SEED=true (RunDemoSeed),"
echo "not an initdb mount. See"
echo "coverage-gap-audit-2026-04-24-v5/unified-audit.md"
echo "cat-u-seed_initdb_schema_drift for the closure rationale."
exit 1
fi
- name: Race Detection
run: go test -race ./internal/service/... ./internal/api/handler/... ./internal/api/middleware/... ./internal/scheduler/... ./internal/connector/... ./internal/crypto/... ./internal/domain/... ./internal/validation/... ./internal/tlsprobe/... -count=1 -timeout 300s